EnhancerDB
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  3. rs186955459[chr12:116897961]
Enhancers that have rs186955459[chr12:116897961]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 116889515 116899995 enh15029
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Kidney Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Lung Muscle (A673) Heart
Transcript factors that have rs186955459[chr12:116897961]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 116897686 116898282 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21577049
chr12 116897889 116898485 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21577050
chr12 116897946 116897967 ZNF263 JASPAR yes 123998173
chr12 116897954 116897964 SP1 JASPAR yes 123998174
chr12 116897954 116897975 ZNF263 JASPAR yes 123998175
chr12 116897955 116897962 CEBPA TRANSFAC yes 123998176
chr12 116897959 116897979 PPARG JASPAR yes 123998177
chr12 116897960 116897974 PLAG1 JASPAR yes 123998178
Genes associated with rs186955459[chr12:116897961], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More