EnhancerDB
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Enhancers that have rs187006488[chr16:4263454]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 4260205 4271990 enh16513
Skin (Keratinocyte) Cervix (HeLa-S3) Kidney Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Lung Lung (A549) Stomach Placenta Colon (HCT116) Thyroid Muscle (Myoblast) Breast Uterus Heart
Transcript factors that have rs187006488[chr16:4263454]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 4263014 4264497 TCF7L2 GTRD no Colon (HCT116) 21686228
chr16 4263014 4264497 TCF7L2 GTRD no Colon (HCT116) 108175748
chr16 4263098 4265111 TCF7L2 GTRD no Colon (HCT116) 21686229
chr16 4263098 4265111 TCF7L2 GTRD no Colon (HCT116) 108175749
chr16 4263132 4264235 ZNF274 GTRD no Bone Marrow (K562) 108175750
chr16 4263144 4265259 TCF7L2 GTRD no Colon (HCT116) 21686230
chr16 4263144 4265259 TCF7L2 GTRD no Colon (HCT116) 108175751
chr16 4263171 4264255 ZNF274 GTRD no Bone Marrow (K562) 108175752
chr16 4263172 4264705 TCF7L2 GTRD no Colon (HCT116) 21686231
chr16 4263172 4264705 TCF7L2 GTRD no Colon (HCT116) 108175753
chr16 4263172 4265467 ZNF143 GTRD no Epithelial (MCF-7) 108175754
chr16 4263183 4265378 TCF7L2 GTRD no Colon (HCT116) 21686232
chr16 4263183 4265378 TCF7L2 GTRD no Colon (HCT116) 108175755
chr16 4263223 4264297 ZNF143 GTRD no Epithelial (MCF-7) 108175756
chr16 4263226 4264393 TCF7L2 GTRD no Colon (HCT116) 21686233
chr16 4263226 4264393 TCF7L2 GTRD no Colon (HCT116) 108175757
chr16 4263233 4264810 TCF7L2 GTRD no Colon (HCT116) 21686234
chr16 4263233 4264810 TCF7L2 GTRD no Colon (HCT116) 108175758
chr16 4263235 4264107 TCF7L2 GTRD no Colon (HCT116) 21686235
chr16 4263235 4264107 TCF7L2 GTRD no Colon (HCT116) 108175759
chr16 4263240 4264435 ZNF143 GTRD no Epithelial (MCF-7) 108175760
chr16 4263260 4264132 ZNF143 GTRD no Epithelial (MCF-7) 108175761
chr16 4263262 4264829 ZNF274 GTRD no Bone Marrow (K562) 108175762
chr16 4263291 4265091 ZNF143 GTRD no Epithelial (MCF-7) 108175763
chr16 4263301 4264204 ZNF274 GTRD no Bone Marrow (K562) 108175764
chr16 4263306 4264278 TCF7L2 GTRD no Colon (HCT116) 21686236
chr16 4263306 4264278 TCF7L2 GTRD no Colon (HCT116) 108175765
chr16 4263345 4265194 ZNF274 GTRD no Bone Marrow (K562) 108175766
chr16 4263350 4264182 ZNF274 GTRD no Bone Marrow (K562) 108175767
chr16 4263385 4264236 ZNF274 GTRD no Bone Marrow (K562) 108175768
chr16 4263422 4264088 ZNF274 GTRD no Bone Marrow (K562) 108175769
chr16 4263423 4264181 ZNF274 GTRD no Bone Marrow (K562) 108175770
chr16 4263451 4263466 NR2C2 JASPAR yes 9262903
Genes associated with rs187006488[chr16:4263454], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More