EnhancerDB
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  3. rs1870213[chr12:52610238]
Enhancers that have rs1870213[chr12:52610238]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52591245 52620175 enh14727
Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs1870213[chr12:52610238]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52609804 52610321 REST UCSC Txn Factor no Conserved 108033751
chr12 52609804 52610321 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108033752
chr12 52609947 52610248 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21546807
chr12 52610232 52610246 GATA2 JASPAR yes 120929204
chr12 52610234 52610242 GATA3 JASPAR yes 120929205
chr12 52610238 52610250 YY1 JASPAR yes 120929206
Genes associated with rs1870213[chr12:52610238], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More