EnhancerDB
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  3. rs187113949[chr6:13425079]
Enhancers that have rs187113949[chr6:13425079]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 13417125 13443009 enh8962
Brain (SK-N-MC) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Placenta Muscle (Myotube) Lung Muscle (A673) Heart
Transcript factors that have rs187113949[chr6:13425079]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 13425072 13425083 FOXC1 JASPAR yes 100029167
chr6 13425072 13425084 FOXC2 JASPAR yes 100029168
chr6 13425073 13425085 FOXI1 JASPAR yes 100029169
chr6 13425074 13425079 TBP TRANSFAC yes 100029171
chr6 13425075 13425083 FOXG1 JASPAR yes 100029172
Genes associated with rs187113949[chr6:13425079], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More