EnhancerDB
  1. Home
  2. SNP
  3. rs187129346[chr5:172175838]
Enhancers that have rs187129346[chr5:172175838]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172156284 172181075 enh22815
Liver Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs187129346[chr5:172175838]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172175836 172175847 ELK4 JASPAR yes 67821920
chr5 172175836 172175849 ELF3 JASPAR yes 67821921
chr5 172175837 172175847 GABPA JASPAR yes 67821922
chr5 172175837 172175849 ELF4 JASPAR yes 67821923
Genes associated with rs187129346[chr5:172175838], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More