EnhancerDB
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  3. rs187130601[chr17:49016574]
Enhancers that have rs187130601[chr17:49016574]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 49015225 49039275 enh17224
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs187130601[chr17:49016574]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 49014272 49017787 ZNF143 GTRD no Epithelial (MCF-7) 21771342
chr17 49014272 49017787 ZNF143 GTRD no Epithelial (MCF-7) 21771343
chr17 49015169 49017460 ZNF143 GTRD no Epithelial (MCF-7) 21771360
chr17 49015169 49017460 ZNF143 GTRD no Epithelial (MCF-7) 21771361
chr17 49015271 49017444 ZNF143 GTRD no Epithelial (MCF-7) 21771363
chr17 49015983 49017186 ZNF143 GTRD no Epithelial (MCF-7) 21771371
chr17 49016212 49017338 ZNF143 GTRD no Epithelial (MCF-7) 21771373
chr17 49016263 49017399 TCF7L2 GTRD no Colon (HCT116) 21771374
chr17 49016346 49017427 TCF7L2 GTRD no Colon (HCT116) 21771375
chr17 49016348 49017174 TCF7L2 GTRD no Colon (HCT116) 21771376
chr17 49016386 49017309 TCF7L2 GTRD no Colon (HCT116) 21771377
chr17 49016389 49017463 TCF7L2 GTRD no Colon (HCT116) 21771378
chr17 49016419 49016846 ZNF143 GTRD no Epithelial (MCF-7) 21771379
chr17 49016419 49017421 ZNF143 GTRD no Epithelial (MCF-7) 21771380
chr17 49016444 49017441 ZNF143 GTRD no Epithelial (MCF-7) 21771381
chr17 49016464 49017470 ZNF143 GTRD no Epithelial (MCF-7) 21771382
chr17 49016480 49017337 TCF7L2 GTRD no Colon (HCT116) 21771383
chr17 49016481 49017487 ZNF143 GTRD no Epithelial (MCF-7) 21771384
chr17 49016547 49017430 TCF7L2 GTRD no Colon (HCT116) 21771385
chr17 49016555 49017005 TCF7L2 GTRD no Colon (HCT116) 21771386
Genes associated with rs187130601[chr17:49016574], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More