EnhancerDB
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  3. rs187299553[chr12:52532478]
Enhancers that have rs187299553[chr12:52532478]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52531174 52553795 enh2357
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs187299553[chr12:52532478]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52532467 52532488 REST JASPAR yes 120920653
chr12 52532468 52532487 REST JASPAR yes 120920654
chr12 52532478 52532482 LFA1 TRANSFAC yes 120920655
Genes associated with rs187299553[chr12:52532478], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More