EnhancerDB
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  3. rs187359780[chr17:25898038]
Enhancers that have rs187359780[chr17:25898038]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 25884725 25904399 enh17065
Bone Marrow (K562) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Blood (T-cell) Astrocyte Stomach Muscle (A673) Placenta Colon (HCT116) Uterus Spleen Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs187359780[chr17:25898038]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 25898035 25898045 SP1 JASPAR yes 53647002
chr17 25898036 25898044 SP1 TRANSFAC yes 53647003
chr17 25898036 25898045 SP1 TRANSFAC yes 53647004
chr17 25898036 25898046 SP1 JASPAR yes 53647005
chr17 25898037 25898042 SP1 TRANSFAC yes 53647006
chr17 25898038 25898043 SP1 TRANSFAC yes 53647007
chr17 25898038 25898044 SP1 TRANSFAC yes 53647008
Genes associated with rs187359780[chr17:25898038], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More