EnhancerDB
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  3. rs187430346[chr5:90613299]
Enhancers that have rs187430346[chr5:90613299]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 90595425 90613326 enh22427
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs187430346[chr5:90613299]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 90613279 90613300 IRF1 JASPAR yes 64192364
chr5 90613289 90613310 IRF1 JASPAR yes 64192369
chr5 90613293 90613299 SOX10 JASPAR yes 64192370
chr5 90613294 90613306 IRF1 JASPAR yes 64192371
Genes associated with rs187430346[chr5:90613299], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More