EnhancerDB
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  3. rs187444399[chr1:203483138]
Enhancers that have rs187444399[chr1:203483138]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 203471885 203497995 enh12556
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs187444399[chr1:203483138]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 203482554 203483204 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21369117
chr1 203482754 203483404 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21369118
chr1 203482802 203484325 ZNF143 GTRD no Epithelial (MCF-7) 21369119
chr1 203482808 203484275 ZNF143 GTRD no Epithelial (MCF-7) 21369120
chr1 203482960 203483492 TCF7L2 GTRD no Colon (HCT116) 21369121
chr1 203483059 203483609 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21369122
chr1 203483125 203483145 ESR1 JASPAR yes 34634063
chr1 203483125 203483984 ZNF143 GTRD no Epithelial (MCF-7) 21369123
chr1 203483127 203483138 USF1 JASPAR yes 34634064
chr1 203483127 203483138 USF2 JASPAR yes 34634065
chr1 203483128 203483146 ESR1 JASPAR yes 34634066
chr1 203483129 203483147 ESR2 JASPAR yes 34634067
chr1 203483130 203483145 ESR2 JASPAR yes 34634068
Genes associated with rs187444399[chr1:203483138], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More