EnhancerDB
  1. Home
  2. SNP
  3. rs187565542[chr5:154156740]
Enhancers that have rs187565542[chr5:154156740]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 154145125 154165844 enh8815
Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs187565542[chr5:154156740]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 154156731 154156740 SOX9 JASPAR yes 67057599
chr5 154156738 154156746 FOXC1 JASPAR yes 67057600
chr5 154156740 154156747 NKX3-1 JASPAR yes 67057601
Genes associated with rs187565542[chr5:154156740], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More