EnhancerDB
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  3. rs187620245[chr1:27469165]
Enhancers that have rs187620245[chr1:27469165]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27456674 27477960 enh171
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs187620245[chr1:27469165]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27469164 27469180 RFX2 JASPAR yes 27681242
chr1 27469164 27469180 RFX3 JASPAR yes 27681243
chr1 27469164 27469180 RFX4 JASPAR yes 27681244
chr1 27469164 27469180 RFX5 JASPAR yes 27681245
chr1 27469165 27469184 RFX2 JASPAR yes 27681246
Genes associated with rs187620245[chr1:27469165], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More