EnhancerDB
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  3. rs1876556[chr6:106252416]
Enhancers that have rs1876556[chr6:106252416]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 106226176 106267255 enh23455
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen
chr6 106252415 106252491 vista52946
VISTA
Transcript factors that have rs1876556[chr6:106252416]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 106252366 106252622 CEBPB UCSC Txn Factor no Conserved 108541133
chr6 106252409 106252421 TEF JASPAR yes 70409001
chr6 106252409 106252421 TEF JASPAR yes 103982927
Genes associated with rs1876556[chr6:106252416], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More