EnhancerDB
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  3. rs187829835[chr1:27887858]
Enhancers that have rs187829835[chr1:27887858]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27879543 27929405 enh11668
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Lung Muscle (A673) Heart
Transcript factors that have rs187829835[chr1:27887858]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27881821 27888089 ZNF274 GTRD no Blood (GM12878) 107802589
chr1 27882919 27893564 ZNF274 GTRD no Blood (GM12878) 107802590
chr1 27882919 27893564 ZNF274 GTRD no Blood (GM12878) 107802591
chr1 27882919 27893564 ZNF274 GTRD no Blood (GM12878) 107802592
chr1 27887852 27887866 E2F7 JASPAR yes 27709226
chr1 27887853 27887863 ZNF740 JASPAR yes 27709227
chr1 27887854 27887864 ZNF740 JASPAR yes 27709228
chr1 27887854 27887866 E2F8 JASPAR yes 27709229
Genes associated with rs187829835[chr1:27887858], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 28199055 28213196 + THEMIS2 ENSG00000130775.11 28199055 311197 Pancreas 0.0636538 400