EnhancerDB
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  3. rs187885646[chr12:50926085]
Enhancers that have rs187885646[chr12:50926085]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 50906745 50954311 enh2346
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs187885646[chr12:50926085]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 50923339 50928617 ZNF274 GTRD no Bone Marrow (K562) 21545031
chr12 50923339 50928617 ZNF274 GTRD no Bone Marrow (K562) 108031199
chr12 50923339 50928617 ZNF274 GTRD no Bone Marrow (K562) 108031200
chr12 50924125 50926098 ZNF274 GTRD no Liver (HepG2) 21545069
chr12 50924125 50926098 ZNF274 GTRD no Liver (HepG2) 108031238
chr12 50926075 50926087 SRF JASPAR yes 120839449
chr12 50926078 50926088 RORA JASPAR yes 120839451
chr12 50926079 50926092 NR2F1 JASPAR yes 120839452
chr12 50926081 50926089 NR4A2 JASPAR yes 120839453
chr12 50926083 50926087 ESR1 TRANSFAC yes 120839454
Genes associated with rs187885646[chr12:50926085], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr12 50260679 50298000 - FAIM2 ENSG00000135472.4 50298000 628085 Heart 0.0547989 12039