EnhancerDB
  1. Home
  2. SNP
  3. rs187947480[chr3:8549198]
Enhancers that have rs187947480[chr3:8549198]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 8538945 8574055 enh35162
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Stomach Brain (SK-N-SH) Ovary Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Lung Muscle (A673) Heart
Transcript factors that have rs187947480[chr3:8549198]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 8549183 8549201 NR3C1 JASPAR yes 298339
chr3 8549185 8549200 AR JASPAR yes 298340
chr3 8549190 8549211 IRF1 JASPAR yes 298341
chr3 8549196 8549217 IRF1 JASPAR yes 298342
chr3 8549198 8549213 PRDM1 JASPAR yes 298343
chr3 8549198 8549213 STAT2 JASPAR yes 298344
Genes associated with rs187947480[chr3:8549198], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More