EnhancerDB
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  3. rs187953621[chr17:78769366]
Enhancers that have rs187953621[chr17:78769366]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 78745025 78774551 enh4637
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Heart
Transcript factors that have rs187953621[chr17:78769366]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 78769358 78769373 FOXP1 JASPAR yes 56280761
chr17 78769358 78769379 IRF1 JASPAR yes 56280762
chr17 78769359 78769371 FOXC2 JASPAR yes 56280763
chr17 78769359 78769380 IRF1 JASPAR yes 56280764
chr17 78769363 78769378 FOXP1 JASPAR yes 56280766
Genes associated with rs187953621[chr17:78769366], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More