EnhancerDB
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  3. rs188003197[chr1:16519649]
Enhancers that have rs188003197[chr1:16519649]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 16486025 16524255 enh11545
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs188003197[chr1:16519649]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 16519636 16519651 NR2C2 JASPAR yes 27034240
chr1 16519645 16519650 SP1 TRANSFAC yes 27034242
chr1 16519646 16519651 SP1 TRANSFAC yes 27034243
chr1 16519649 16519662 NFKB1 JASPAR yes 27034244
Genes associated with rs188003197[chr1:16519649], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More