EnhancerDB
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  3. rs188019852[chr3:56896681]
Enhancers that have rs188019852[chr3:56896681]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 56877665 56906735 enh35421
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Blood (OCI-LY7) Blood (GM12878) Stomach Lung (PC-9) Pancreas (Panc1) Uterus Thymus Epithelial (MCF-7)
Transcript factors that have rs188019852[chr3:56896681]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 56896669 56896682 SCRT2 JASPAR yes 2605121
chr3 56896677 56896694 RARA JASPAR yes 2605122
chr3 56896677 56896694 RXRA JASPAR yes 2605123
chr3 56896681 56896695 RXRB JASPAR yes 2605124
chr3 56896681 56896695 RXRG JASPAR yes 2605125
chr3 56896681 56896696 NR2C2 JASPAR yes 2605126
Genes associated with rs188019852[chr3:56896681], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More