EnhancerDB
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  3. rs188028237[chr6:12319739]
Enhancers that have rs188028237[chr6:12319739]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 12317105 12339155 enh23034
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Blood (GM12878) Stomach Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs188028237[chr6:12319739]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 12319725 12319741 NFYA JASPAR yes 99959849
chr6 12319727 12319739 PBX1 JASPAR yes 99959850
chr6 12319736 12319751 IRF9 JASPAR yes 99959854
Genes associated with rs188028237[chr6:12319739], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More