EnhancerDB
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  3. rs188050729[chr11:3949556]
Enhancers that have rs188050729[chr11:3949556]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 3945989 3987735 enh13713
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Ovary Blood (T-cell) Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Blood (GM12878) Placenta Thyroid Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Uterus Thymus Stomach
Transcript factors that have rs188050729[chr11:3949556]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 3949551 3949561 BHLHE40 JASPAR yes 37077605
chr11 3949551 3949561 BHLHE41 JASPAR yes 37077606
chr11 3949551 3949561 MLXIPL JASPAR yes 37077607
chr11 3949551 3949561 MLX JASPAR yes 37077608
chr11 3949551 3949561 SREBF2 JASPAR yes 37077609
chr11 3949551 3949561 TFE3 JASPAR yes 37077610
chr11 3949551 3949561 TFEB JASPAR yes 37077611
chr11 3949551 3949562 USF1 JASPAR yes 37077612
chr11 3949551 3949562 USF2 JASPAR yes 37077613
chr11 3949552 3949562 MAX JASPAR yes 37077614
chr11 3949553 3949558 MYC TRANSFAC yes 37077615
chr11 3949553 3949558 USF1 TRANSFAC yes 37077616
chr11 3949553 3949558 USF2 TRANSFAC yes 37077617
Genes associated with rs188050729[chr11:3949556], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More