EnhancerDB
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Enhancers that have rs188069062[chr18:57553409]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 57537325 57555285 enh17763
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Muscle (A673) Placenta Colon (HCT116) Uterus Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Neural Stem Cells (H9) Stomach
Transcript factors that have rs188069062[chr18:57553409]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 57552769 57553453 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21824748
chr18 57552769 57553453 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108338765
chr18 57552779 57553439 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21824749
chr18 57552779 57553439 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108338766
chr18 57552839 57553435 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21824750
chr18 57552839 57553435 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108338767
chr18 57552842 57553472 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21824751
chr18 57552842 57553472 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108338768
chr18 57552897 57553417 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21824753
chr18 57552897 57553417 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108338771
chr18 57552904 57553420 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21824756
chr18 57552904 57553420 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108338776
chr18 57552950 57553426 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21824760
chr18 57552950 57553426 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108338780
chr18 57553056 57553492 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21824777
chr18 57553056 57553492 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108338799
chr18 57553076 57553456 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21824778
chr18 57553076 57553456 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108338800
chr18 57553109 57553519 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21824780
chr18 57553109 57553519 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108338802
chr18 57553252 57553527 TCF7L2 GTRD no Colon (HCT116) 21824783
chr18 57553252 57553527 TCF7L2 GTRD no Colon (HCT116) 108338805
chr18 57553400 57553414 SPI1 JASPAR yes 111061576
chr18 57553401 57553419 RARA JASPAR yes 111061577
Genes associated with rs188069062[chr18:57553409], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More