EnhancerDB
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  3. rs188082171[chr16:11705493]
Enhancers that have rs188082171[chr16:11705493]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 11694149 11728755 enh16539
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs188082171[chr16:11705493]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 11705099 11706970 ZNF143 GTRD no Epithelial (MCF-7) 21691089
chr16 11705099 11706970 ZNF143 GTRD no Epithelial (MCF-7) 108182067
chr16 11705138 11706930 ZNF143 GTRD no Epithelial (MCF-7) 21691090
chr16 11705138 11706930 ZNF143 GTRD no Epithelial (MCF-7) 108182068
chr16 11705161 11706939 ZNF143 GTRD no Epithelial (MCF-7) 21691091
chr16 11705161 11706939 ZNF143 GTRD no Epithelial (MCF-7) 108182069
chr16 11705189 11706806 ZNF143 GTRD no Epithelial (MCF-7) 21691092
chr16 11705189 11706806 ZNF143 GTRD no Epithelial (MCF-7) 108182070
chr16 11705197 11706900 ZNF143 GTRD no Epithelial (MCF-7) 21691093
chr16 11705197 11706900 ZNF143 GTRD no Epithelial (MCF-7) 108182071
chr16 11705261 11706828 ZNF274 GTRD no Bone Marrow (K562) 21691094
chr16 11705261 11706828 ZNF274 GTRD no Bone Marrow (K562) 108182072
chr16 11705263 11706755 ZNF274 GTRD no Bone Marrow (K562) 21691095
chr16 11705263 11706755 ZNF274 GTRD no Bone Marrow (K562) 108182073
chr16 11705279 11706869 ZNF143 GTRD no Epithelial (MCF-7) 21691096
chr16 11705279 11706869 ZNF143 GTRD no Epithelial (MCF-7) 108182074
chr16 11705485 11705506 IRF1 JASPAR yes 9525105
chr16 11705487 11705502 FOXP1 JASPAR yes 9525106
chr16 11705487 11705508 IRF1 JASPAR yes 9525107
chr16 11705489 11705510 IRF1 JASPAR yes 9525108
chr16 11705491 11705512 IRF1 JASPAR yes 9525109
Genes associated with rs188082171[chr16:11705493], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More