EnhancerDB
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  3. rs188085340[chr1:171888299]
Enhancers that have rs188085340[chr1:171888299]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 171877031 171888755 enh43079
Prostate (RWPE1) Lung (A549) Muscle (A673) Colon (HCT116) Thyroid Uterus Lung (PC-9) Muscle (Myotube) Neural Stem Cells (H9) Stomach
Transcript factors that have rs188085340[chr1:171888299]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 171888287 171888301 RORA JASPAR yes 33098579
chr1 171888297 171888312 FOXP1 JASPAR yes 33098580
Genes associated with rs188085340[chr1:171888299], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More