EnhancerDB
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  3. rs188092533[chr1:206861348]
Enhancers that have rs188092533[chr1:206861348]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 206857225 206902007 enh27440
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs188092533[chr1:206861348]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 206861083 206861719 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107863257
chr1 206861123 206861643 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107863258
chr1 206861128 206861708 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107863259
chr1 206861131 206861621 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107863260
chr1 206861136 206861460 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107863261
chr1 206861173 206861843 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107863262
chr1 206861179 206861439 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107863263
chr1 206861185 206861475 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107863264
chr1 206861217 206861473 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107863265
chr1 206861255 206861579 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107863266
chr1 206861282 206861512 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107863267
chr1 206861298 206861514 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107863268
chr1 206861327 206861727 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21372455
chr1 206861327 206861727 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107863269
chr1 206861340 206861353 NR2F1 JASPAR yes 34817287
chr1 206861343 206861351 NR4A2 JASPAR yes 34817288
chr1 206861344 206861354 RORA JASPAR yes 34817289
chr1 206861344 206861359 NR2C2 JASPAR yes 34817290
Genes associated with rs188092533[chr1:206861348], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More