EnhancerDB
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  3. rs188111642[chr3:56951889]
Enhancers that have rs188111642[chr3:56951889]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 56948005 56967995 enh7237
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Lung Heart
Transcript factors that have rs188111642[chr3:56951889]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 56951881 56951895 SPI1 JASPAR yes 2610930
chr3 56951882 56951895 ELF1 JASPAR yes 2610931
chr3 56951883 56951895 EHF JASPAR yes 2610932
chr3 56951883 56951895 ELF1 JASPAR yes 2610933
chr3 56951883 56951895 ELF4 JASPAR yes 2610934
chr3 56951883 56951896 ELF3 JASPAR yes 2610935
chr3 56951883 56951904 IRF1 JASPAR yes 2610936
chr3 56951884 56951895 ELF5 JASPAR yes 2610937
chr3 56951885 56951891 PEA3 TRANSFAC yes 2610938
chr3 56951885 56951895 ETV6 JASPAR yes 2610939
chr3 56951885 56951896 ELK4 JASPAR yes 2610940
chr3 56951885 56951896 FLI1 JASPAR yes 2610941
chr3 56951886 56951894 EHF JASPAR yes 2610942
chr3 56951887 56951894 SPI1 JASPAR yes 2610943
chr3 56951887 56951901 STAT1 JASPAR yes 2610944
chr3 56951887 56951902 PRDM1 JASPAR yes 2610945
Genes associated with rs188111642[chr3:56951889], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More