EnhancerDB
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  3. rs188133424[chr5:90604596]
Enhancers that have rs188133424[chr5:90604596]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 90595425 90613326 enh22427
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr5 90604425 90604632 vista48442
VISTA
Transcript factors that have rs188133424[chr5:90604596]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 90604588 90604609 IRF1 JASPAR yes 64191106
chr5 90604588 90604609 IRF1 JASPAR yes 70682254
chr5 90604592 90604613 IRF1 JASPAR yes 64191107
chr5 90604592 90604613 IRF1 JASPAR yes 70682255
Genes associated with rs188133424[chr5:90604596], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More