EnhancerDB
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  3. rs188166333[chr12:50917547]
Enhancers that have rs188166333[chr12:50917547]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 50906745 50954311 enh2346
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs188166333[chr12:50917547]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 50917534 50917554 TBX19 JASPAR yes 120837878
chr12 50917536 50917552 T JASPAR yes 120837879
chr12 50917543 50917553 TBX21 JASPAR yes 120837880
chr12 50917543 50917554 TBX20 JASPAR yes 120837881
chr12 50917543 50917554 TBX2 JASPAR yes 120837882
chr12 50917543 50917556 EOMES JASPAR yes 120837883
chr12 50917544 50917552 MGA JASPAR yes 120837884
chr12 50917544 50917552 TBX1 JASPAR yes 120837885
chr12 50917544 50917554 TBR1 JASPAR yes 120837886
chr12 50917547 50917558 FOXC1 JASPAR yes 120837887
Genes associated with rs188166333[chr12:50917547], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More