EnhancerDB
  1. Home
  2. SNP
  3. rs188187620[chr6:35332143]
Enhancers that have rs188187620[chr6:35332143]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 35320605 35341715 enh9075
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs188187620[chr6:35332143]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 35332135 35332147 BHLHE23 JASPAR yes 101276463
chr6 35332136 35332146 BHLHE22 JASPAR yes 101276464
chr6 35332136 35332146 NEUROD2 JASPAR yes 101276465
chr6 35332136 35332146 NEUROG2 JASPAR yes 101276466
chr6 35332136 35332146 OLIG1 JASPAR yes 101276467
chr6 35332136 35332146 OLIG2 JASPAR yes 101276468
chr6 35332136 35332146 OLIG3 JASPAR yes 101276469
Genes associated with rs188187620[chr6:35332143], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More