EnhancerDB
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  3. rs188198142[chr17:29825613]
Enhancers that have rs188198142[chr17:29825613]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 29816091 29829595 enh4360
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Blood (T-cell) Lung (PC-9) Blood (OCI-LY7) Blood (GM12878) Placenta Thyroid Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Neural Stem Cells (H9) Thymus Stomach
Transcript factors that have rs188198142[chr17:29825613]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 29825599 29825614 FOXA1 JASPAR yes 53842937
chr17 29825613 29825632 REST JASPAR yes 53842950
Genes associated with rs188198142[chr17:29825613], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More