EnhancerDB
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  3. rs188230725[chr17:57920478]
Enhancers that have rs188230725[chr17:57920478]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 57915645 57936791 enh17263
Astrocyte Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Skin (Keratinocyte) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs188230725[chr17:57920478]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 57914548 57924655 POLR2A UCSC Txn Factor no Conserved 107688742
chr17 57914548 57924655 POLR2A UCSC Txn Factor no Conserved 108278238
chr17 57915107 57924168 ZNF143 GTRD no Epithelial (MCF-7) 21776393
chr17 57915107 57924168 ZNF143 GTRD no Epithelial (MCF-7) 107688870
chr17 57915107 57924168 ZNF143 GTRD no Epithelial (MCF-7) 108278239
chr17 57916673 57921496 ZNF143 GTRD no Epithelial (MCF-7) 21776429
chr17 57916673 57921496 ZNF143 GTRD no Epithelial (MCF-7) 107689020
chr17 57919204 57920984 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21776532
chr17 57919830 57922162 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21776546
chr17 57919863 57923596 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108278240
chr17 57919888 57921264 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21776551
chr17 57919927 57920605 ZNF143 GTRD no Epithelial (MCF-7) 21776555
chr17 57920083 57920559 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21776561
chr17 57920097 57920617 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21776562
chr17 57920140 57920615 ZNF143 GTRD no Epithelial (MCF-7) 21776563
chr17 57920223 57920579 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21776566
chr17 57920274 57920650 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21776568
chr17 57920297 57920817 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21776569
chr17 57920344 57921065 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21776570
chr17 57920348 57921226 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21776571
chr17 57920352 57921181 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21776572
chr17 57920353 57921119 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21776573
chr17 57920382 57920967 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21776574
chr17 57920382 57920975 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21776575
chr17 57920387 57921278 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21776576
chr17 57920398 57920854 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21776577
chr17 57920407 57920923 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21776578
chr17 57920411 57920781 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21776579
chr17 57920417 57920677 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21776580
chr17 57920426 57920786 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21776581
chr17 57920432 57920762 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21776582
chr17 57920433 57920753 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21776583
chr17 57920440 57920820 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21776584
chr17 57920440 57920836 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21776585
chr17 57920447 57920827 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21776586
chr17 57920448 57920888 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21776587
chr17 57920449 57920729 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21776588
chr17 57920449 57920825 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21776589
chr17 57920450 57920806 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21776590
chr17 57920456 57920818 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21776591
chr17 57920469 57920712 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21776592
chr17 57920471 57920485 NR2F1 JASPAR yes 55087728
chr17 57920473 57921003 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21776593
chr17 57920478 57920842 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21776594
Genes associated with rs188230725[chr17:57920478], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More