EnhancerDB
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  3. rs188291536[chr6:25001933]
Enhancers that have rs188291536[chr6:25001933]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 24994525 25030795 enh9006
Brain (SK-N-MC) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Muscle (Myotube) Prostate (RWPE1) Heart
Transcript factors that have rs188291536[chr6:25001933]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 25001915 25001936 IRF1 JASPAR yes 100811727
chr6 25001919 25001940 IRF1 JASPAR yes 100811730
chr6 25001921 25001936 PRDM1 JASPAR yes 100811731
chr6 25001921 25001936 STAT2 JASPAR yes 100811732
chr6 25001922 25001936 SPIC JASPAR yes 100811733
chr6 25001922 25001936 STAT1 JASPAR yes 100811734
chr6 25001923 25001944 IRF1 JASPAR yes 100811735
chr6 25001924 25001939 FOXP1 JASPAR yes 100811736
chr6 25001924 25001945 IRF1 JASPAR yes 100811737
chr6 25001925 25001946 IRF1 JASPAR yes 100811738
chr6 25001926 25001941 FOXP1 JASPAR yes 100811739
chr6 25001926 25001947 IRF1 JASPAR yes 100811740
chr6 25001928 25001943 FOXP1 JASPAR yes 100811741
chr6 25001929 25001944 FOXP1 JASPAR yes 100811742
chr6 25001930 25001945 FOXP1 JASPAR yes 100811743
chr6 25001931 25001946 FOXP1 JASPAR yes 100811744
chr6 25001932 25001947 FOXP1 JASPAR yes 100811745
chr6 25001933 25001948 FOXP1 JASPAR yes 100811746
Genes associated with rs188291536[chr6:25001933], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More