EnhancerDB
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  3. rs188295123[chr5:90605689]
Enhancers that have rs188295123[chr5:90605689]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 90595425 90613326 enh22427
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs188295123[chr5:90605689]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 90605678 90605696 RARA JASPAR yes 64191255
chr5 90605681 90605694 DUXA JASPAR yes 64191256
chr5 90605682 90605693 DUX4 JASPAR yes 64191257
chr5 90605682 90605693 PHOX2A JASPAR yes 64191258
chr5 90605682 90605693 PROP1 JASPAR yes 64191259
Genes associated with rs188295123[chr5:90605689], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More