EnhancerDB
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  3. rs188363080[chr2:28176566]
Enhancers that have rs188363080[chr2:28176566]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 28174945 28191595 enh18379
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs188363080[chr2:28176566]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 28176559 28176570 HOXC11 JASPAR yes 72602061
chr2 28176559 28176570 HOXC12 JASPAR yes 72602062
chr2 28176559 28176570 HOXC13 JASPAR yes 72602063
chr2 28176559 28176570 HOXD12 JASPAR yes 72602064
chr2 28176560 28176570 HOXC10 JASPAR yes 72602065
chr2 28176560 28176570 HOXD11 JASPAR yes 72602066
Genes associated with rs188363080[chr2:28176566], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More