EnhancerDB
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  3. rs188409847[chr1:229255336]
Enhancers that have rs188409847[chr1:229255336]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 229225622 229286295 enh12760
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Ovary Esophagus Liver Blood (T-cell) Blood (OCI-LY7) Stomach Placenta Thyroid Uterus Embryonic Stem Cell Line (H1-hESC) Pancreas Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs188409847[chr1:229255336]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 229254641 229255636 ZNF274 GTRD no Cervix (HeLa-S3) 21390151
chr1 229254808 229255410 ZNF143 GTRD no Epithelial (MCF-7) 21390152
chr1 229254812 229255427 ZNF143 GTRD no Epithelial (MCF-7) 21390153
chr1 229254834 229255456 ZNF274 GTRD no Liver (HepG2) 21390157
chr1 229254835 229255457 ZNF143 GTRD no Epithelial (MCF-7) 21390158
chr1 229254902 229255389 ZNF274 GTRD no Cervix (HeLa-S3) 21390159
chr1 229254960 229255359 ZNF274 GTRD no Cervix (HeLa-S3) 21390162
chr1 229255331 229255346 RUNX2 JASPAR yes 35963134
Genes associated with rs188409847[chr1:229255336], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More