EnhancerDB
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  3. rs188420473[chr1:225631806]
Enhancers that have rs188420473[chr1:225631806]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 225626185 225658051 enh950
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs188420473[chr1:225631806]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 225631794 225631807 ZBTB18 JASPAR yes 35740804
chr1 225631795 225631807 PKNOX2 JASPAR yes 35740805
chr1 225631795 225631807 TGIF1 JASPAR yes 35740806
chr1 225631803 225631814 FOSL2 JASPAR yes 35740807
chr1 225631805 225631821 ZNF143 JASPAR yes 35740808
Genes associated with rs188420473[chr1:225631806], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More