EnhancerDB
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  3. rs188427209[chr1:212467006]
Enhancers that have rs188427209[chr1:212467006]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 212456045 212470579 enh910
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Lung (PC-9) Esophagus Bone (Osteoblast) Lung Blood (OCI-LY7) Blood (GM12878) Colon (HCT116) Uterus Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Neural Stem Cells (H9) Stomach
Transcript factors that have rs188427209[chr1:212467006]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 212467002 212467012 HOXA13 JASPAR yes 35119051
chr1 212467004 212467017 DUXA JASPAR yes 35119052
chr1 212467005 212467016 DUX4 JASPAR yes 35119053
chr1 212467006 212467011 NFY TRANSFAC yes 35119054
Genes associated with rs188427209[chr1:212467006], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More