EnhancerDB
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  3. rs188461457[chr17:39071965]
Enhancers that have rs188461457[chr17:39071965]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 39055145 39077753 enh17145
Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Lung (A549) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs188461457[chr17:39071965]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 39071358 39071974 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21757260
chr17 39071395 39071971 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21757262
chr17 39071428 39071972 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21757265
chr17 39071434 39071974 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21757266
chr17 39071435 39071975 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21757267
chr17 39071957 39071968 NFIL3 JASPAR yes 54244138
chr17 39071960 39071968 GMEB2 JASPAR yes 54244139
Genes associated with rs188461457[chr17:39071965], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More