EnhancerDB
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  3. rs188494012[chr1:27892094]
Enhancers that have rs188494012[chr1:27892094]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27879543 27929405 enh11668
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Lung Muscle (A673) Heart
Transcript factors that have rs188494012[chr1:27892094]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27882919 27893564 ZNF274 GTRD no Blood (GM12878) 107802590
chr1 27882919 27893564 ZNF274 GTRD no Blood (GM12878) 107802591
chr1 27882919 27893564 ZNF274 GTRD no Blood (GM12878) 107802592
chr1 27892086 27892101 NR2C2 JASPAR yes 27709840
chr1 27892089 27892094 SP1 TRANSFAC yes 27709841
chr1 27892089 27892100 E2F4 JASPAR yes 27709842
chr1 27892089 27892100 E2F6 JASPAR yes 27709843
chr1 27892090 27892095 SP1 TRANSFAC yes 27709844
Genes associated with rs188494012[chr1:27892094], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More