EnhancerDB
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  3. rs188494454[chr17:62162496]
Enhancers that have rs188494454[chr17:62162496]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 62157225 62175223 enh17290
Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs188494454[chr17:62162496]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 62159832 62166447 ZNF143 GTRD no Epithelial (MCF-7) 21778613
chr17 62159832 62166447 ZNF143 GTRD no Epithelial (MCF-7) 108282222
chr17 62160289 62166431 ZNF143 GTRD no Epithelial (MCF-7) 21778614
chr17 62160289 62166431 ZNF143 GTRD no Epithelial (MCF-7) 108282223
chr17 62160339 62166409 ZNF143 GTRD no Epithelial (MCF-7) 21778615
chr17 62160339 62166409 ZNF143 GTRD no Epithelial (MCF-7) 108282224
chr17 62161268 62167143 ZNF143 GTRD no Epithelial (MCF-7) 21778623
chr17 62161268 62167143 ZNF143 GTRD no Epithelial (MCF-7) 108282232
chr17 62162494 62162512 MAFF JASPAR yes 55275597
chr17 62162496 62162500 YY1 TRANSFAC yes 55275598
chr17 62162496 62162511 MAFK JASPAR yes 55275599
Genes associated with rs188494454[chr17:62162496], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More