EnhancerDB
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  3. rs188498078[chr3:57954102]
Enhancers that have rs188498078[chr3:57954102]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 57952365 57980395 enh7247
Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs188498078[chr3:57954102]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 57954087 57954102 FOXP1 JASPAR yes 2658540
chr3 57954088 57954103 FOXP1 JASPAR yes 2658541
chr3 57954088 57954109 IRF1 JASPAR yes 2658542
chr3 57954089 57954104 FOXP1 JASPAR yes 2658543
chr3 57954089 57954110 IRF1 JASPAR yes 2658544
chr3 57954090 57954105 FOXP1 JASPAR yes 2658545
chr3 57954090 57954111 IRF1 JASPAR yes 2658546
chr3 57954091 57954106 FOXP1 JASPAR yes 2658547
chr3 57954093 57954108 FOXP1 JASPAR yes 2658548
chr3 57954094 57954115 IRF1 JASPAR yes 2658549
chr3 57954095 57954110 FOXP1 JASPAR yes 2658550
chr3 57954096 57954117 IRF1 JASPAR yes 2658551
chr3 57954100 57954115 PRDM1 JASPAR yes 2658552
Genes associated with rs188498078[chr3:57954102], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More