EnhancerDB
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  3. rs188500788[chr1:212098417]
Enhancers that have rs188500788[chr1:212098417]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 212081505 212111174 enh12636
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Pancreas Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs188500788[chr1:212098417]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 212098358 212098944 ZNF274 GTRD no Blood (GM12878) 21377608
chr1 212098395 212098998 ZNF274 GTRD no Bone Marrow (K562) 21377609
chr1 212098415 212098432 PAX1 JASPAR yes 35092351
chr1 212098415 212098432 PAX9 JASPAR yes 35092352
Genes associated with rs188500788[chr1:212098417], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More