EnhancerDB
  1. Home
  2. SNP
  3. rs188509560[chr6:33572956]
Enhancers that have rs188509560[chr6:33572956]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 33549445 33581115 enh23159
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs188509560[chr6:33572956]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 33572949 33572963 SPI1 JASPAR yes 101160085
chr6 33572955 33572969 POU1F1 JASPAR yes 101160086
Genes associated with rs188509560[chr6:33572956], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More