EnhancerDB
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  3. rs188516594[chr6:86112090]
Enhancers that have rs188516594[chr6:86112090]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 86109285 86118699 enh23394
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Blood (T-cell) Stomach Skin (Keratinocyte) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs188516594[chr6:86112090]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 86112072 86112092 TP63 JASPAR yes 103251745
chr6 86112084 86112099 TFAP2A JASPAR yes 103251746
chr6 86112084 86112099 TFAP2C JASPAR yes 103251747
chr6 86112087 86112099 TFAP2C JASPAR yes 103251748
Genes associated with rs188516594[chr6:86112090], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More