EnhancerDB
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  3. rs188540387[chr12:96800315]
Enhancers that have rs188540387[chr12:96800315]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 96795782 96855361 enh14922
Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs188540387[chr12:96800315]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 96800310 96800319 SNAI2 JASPAR yes 123066499
chr12 96800310 96800320 ID4 JASPAR yes 123066500
chr12 96800310 96800320 TCF3 JASPAR yes 123066501
chr12 96800310 96800320 TCF4 JASPAR yes 123066502
chr12 96800315 96800324 HIC2 JASPAR yes 123066503
Genes associated with rs188540387[chr12:96800315], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More