EnhancerDB
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  3. rs188547348[chr12:105076116]
Enhancers that have rs188547348[chr12:105076116]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 105058565 105083795 enh14949
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs188547348[chr12:105076116]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 105076019 105076834 TEF1 GTRD no Bone (Osteoblast) 21569727
chr12 105076019 105076834 TEF1 GTRD no Bone (Osteoblast) 108055674
chr12 105076108 105076123 SOX21 JASPAR yes 123407103
Genes associated with rs188547348[chr12:105076116], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr12 104458235 104498639 + HCFC2 ENSG00000111727.7 104458235 577477 Ovary 0.21625 12470
chr12 105501102 105562912 + KIAA1033 ENSG00000136051.9 105501102 424986 Adrenal 0.131819 12478