EnhancerDB
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  3. rs188566679[chr12:116896647]
Enhancers that have rs188566679[chr12:116896647]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 116889515 116899995 enh15029
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Kidney Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Lung Muscle (A673) Heart
Transcript factors that have rs188566679[chr12:116896647]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 116896640 116896653 ELF1 JASPAR yes 123997940
chr12 116896641 116896651 ELK1 JASPAR yes 123997941
chr12 116896641 116896653 EHF JASPAR yes 123997942
chr12 116896641 116896653 ELF1 JASPAR yes 123997943
chr12 116896641 116896653 ELF4 JASPAR yes 123997944
chr12 116896641 116896654 ELF3 JASPAR yes 123997945
chr12 116896642 116896653 ELF5 JASPAR yes 123997946
chr12 116896643 116896652 ELK4 JASPAR yes 123997947
chr12 116896643 116896653 ELK1 JASPAR yes 123997948
chr12 116896643 116896653 ELK3 JASPAR yes 123997949
chr12 116896643 116896653 ERF JASPAR yes 123997950
chr12 116896643 116896653 ERG JASPAR yes 123997951
chr12 116896643 116896653 ETS1 JASPAR yes 123997952
chr12 116896643 116896653 ETV1 JASPAR yes 123997953
chr12 116896643 116896653 ETV3 JASPAR yes 123997954
chr12 116896643 116896653 ETV4 JASPAR yes 123997955
chr12 116896643 116896653 ETV5 JASPAR yes 123997956
chr12 116896643 116896653 ETV6 JASPAR yes 123997957
chr12 116896643 116896653 FEV JASPAR yes 123997958
chr12 116896643 116896653 FLI1 JASPAR yes 123997959
chr12 116896643 116896653 GABPA JASPAR yes 123997960
chr12 116896643 116896654 ELK4 JASPAR yes 123997961
chr12 116896643 116896654 FLI1 JASPAR yes 123997962
chr12 116896644 116896652 FEV JASPAR yes 123997963
chr12 116896645 116896651 ETS1 JASPAR yes 123997964
chr12 116896645 116896651 SPI1 JASPAR yes 123997965
Genes associated with rs188566679[chr12:116896647], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More