EnhancerDB
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  3. rs188630428[chr12:121289867]
Enhancers that have rs188630428[chr12:121289867]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 121282565 121298722 enh2642
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Muscle (A673)
Transcript factors that have rs188630428[chr12:121289867]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 121289855 121289867 PKNOX1 JASPAR yes 124189485
chr12 121289855 121289867 PKNOX2 JASPAR yes 124189486
chr12 121289855 121289867 TGIF1 JASPAR yes 124189487
chr12 121289855 121289867 TGIF2 JASPAR yes 124189488
chr12 121289856 121289868 TAL1 JASPAR yes 124189491
Genes associated with rs188630428[chr12:121289867], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More