EnhancerDB
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  3. rs188676939[chr1:223905053]
Enhancers that have rs188676939[chr1:223905053]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 223886085 223931782 enh12712
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs188676939[chr1:223905053]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 223905048 223905053 ETS2 TRANSFAC yes 35671858
chr1 223905048 223905058 TEAD4 JASPAR yes 35671859
chr1 223905050 223905067 BCL6B JASPAR yes 35671860
Genes associated with rs188676939[chr1:223905053], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More