EnhancerDB
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  3. rs1887039[chr1:153488723]
Enhancers that have rs1887039[chr1:153488723]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 153476105 153501977 enh12269
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 153488459 153488748 vista3337
VISTA
Transcript factors that have rs1887039[chr1:153488723]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 153488044 153488869 POLR2A UCSC Txn Factor no Conserved 107831096
chr1 153488174 153488834 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21339540
chr1 153488174 153488834 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107831099
chr1 153488251 153488901 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21339542
chr1 153488251 153488901 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107831101
chr1 153488337 153488733 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21339547
chr1 153488337 153488733 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107831106
chr1 153488358 153488734 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21339551
chr1 153488358 153488734 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107831111
chr1 153488399 153488769 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21339557
chr1 153488399 153488769 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107831120
chr1 153488435 153488819 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21339559
chr1 153488435 153488819 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107831122
chr1 153488486 153488774 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21339561
chr1 153488486 153488774 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 107831124
chr1 153488552 153489253 ZBTB33 GTRD no Brain (SK-N-SH) 21339562
chr1 153488552 153489253 ZBTB33 GTRD no Brain (SK-N-SH) 107831125
chr1 153488557 153489253 ZBTB33 GTRD no Brain (SK-N-SH) 21339563
chr1 153488557 153489253 ZBTB33 GTRD no Brain (SK-N-SH) 107831126
chr1 153488573 153489214 ZBTB33 GTRD no Brain (SK-N-SH) 21339564
chr1 153488573 153489214 ZBTB33 GTRD no Brain (SK-N-SH) 107831127
chr1 153488608 153489279 P63 GTRD no Skin (Keratinocyte) 21339565
chr1 153488608 153489279 P63 GTRD no Skin (Keratinocyte) 107831128
chr1 153488617 153489256 ZBTB33 GTRD no Brain (SK-N-SH) 21339566
chr1 153488617 153489256 ZBTB33 GTRD no Brain (SK-N-SH) 107831129
chr1 153488625 153489389 P63 GTRD no Skin (Keratinocyte) 21339567
chr1 153488625 153489389 P63 GTRD no Skin (Keratinocyte) 107831130
chr1 153488630 153489165 ZBTB33 GTRD no Brain (SK-N-SH) 21339568
chr1 153488630 153489165 ZBTB33 GTRD no Brain (SK-N-SH) 107831131
chr1 153488633 153489072 ZBTB33 GTRD no Brain (SK-N-SH) 21339569
chr1 153488633 153489072 ZBTB33 GTRD no Brain (SK-N-SH) 107831132
chr1 153488638 153489195 ZBTB33 GTRD no Brain (SK-N-SH) 21339570
chr1 153488638 153489195 ZBTB33 GTRD no Brain (SK-N-SH) 107831133
chr1 153488642 153489224 ZBTB33 GTRD no Brain (SK-N-SH) 21339571
chr1 153488642 153489224 ZBTB33 GTRD no Brain (SK-N-SH) 107831134
chr1 153488664 153489243 ZBTB33 GTRD no Brain (SK-N-SH) 21339572
chr1 153488664 153489243 ZBTB33 GTRD no Brain (SK-N-SH) 107831135
chr1 153488669 153489245 ZBTB33 GTRD no Brain (SK-N-SH) 21339573
chr1 153488669 153489245 ZBTB33 GTRD no Brain (SK-N-SH) 107831136
chr1 153488711 153489277 ZBTB33 GTRD no Brain (SK-N-SH) 21339574
chr1 153488711 153489277 ZBTB33 GTRD no Brain (SK-N-SH) 107831137
chr1 153488717 153488737 PPARG JASPAR yes 32255714
chr1 153488717 153488737 PPARG JASPAR yes 118370997
chr1 153488722 153488727 GATA2 JASPAR yes 32255715
chr1 153488722 153488727 GATA2 JASPAR yes 118370998
Genes associated with rs1887039[chr1:153488723], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More